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# Updating the annotation environment
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* Synchronize updates in this repository by pulling them from the remote.
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``` bash
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``` console
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user@host:~$ cd $HOME/repo/blocks
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user@host:~/repo/blocks$ git pull
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```
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* Synchronize updates in the environment's software dependencies.
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``` bash
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``` console
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user@host:~/repo/blocks$ conda deactivate
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user@host:~/repo/blocks$ conda env update --file blocks-analysis.yml
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user@host:~/repo/blocks$ conda activate blocks-analysis
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```
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* Install the new changes.
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``` console
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user@host:~/repo/blocks$ python setup.py install
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```
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# Pulling from git when your local version has been modified
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Here's a typical scenario:
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