Eyetracker-Scripts-HowTo.md

 # Overview and workflow
 
-1. Run `impute_aoi_hits.py`
-2. Run `segment_tobii_export.py`
-3. Run `make_eyetracker_labels.py`
-4. Move segmented Tobii export files and eyetracker label files to the remove server
-5. Run `compute_stats.py`
-6. Run `count_aoi_visits.py`
+1. Impute AOI hits in the Tobii export file.
+   ``` console
+   $ python impute_aoi_hits.py
+   ```
+2. Segment the Tobii export file into smaller files (each one corresponds to an overhead video).
+   ``` console
+   $ python segment_tobii_export.py
+   ```
+3. Convert overhead video labels to match eyetracker timestamp indices.
+   ``` console
+   $ python make_eyetracker_labels.py
+   ```
+4. Move segmented Tobii export files and eyetracker label files to the remove server.
+   ``` console
+   $ cp ~/eyetracker_labels /Volumes/lcsr-cogsci$/ProcessedData/eyetracker_labels
+   $ cp ~/eyetracker_segments /Volumes/lcsr-cogsci$/ProcessedData/eyetracker_segments
+
+5. Parse annotations and compute action times.
+   ``` console
+   $ python compute_stats.py
+   ```
+6. Count AOI visits.
+   ``` console
+   $ python count_aoi_visits.py
+   ```
 
 # Processing the Tobii Pro Lab Data Export